NMR study of the cataract-linked P23T mutant of human γD-crystallin shows minor changes in hydrophobic patches that reflect its retrograde solubility

The Pro23 to Thr (P23T) mutation in human γD-crystallin (HGD) shows several cataract phenotypes. We found earlier [A. Pande, O. Annunziata, N. Asherie, O. Ogun, G.B. Benedek, J. Pande, Decrease in protein solubility and cataract formation caused by the Pro23 to Thr mutation in human gamma D-crystallin, Biochemistry 44 (2005) 2491-2500] that the mutation dramatically lowers the solubility of P23T but the overall protein fold is maintained. Recently we observed that solutions of P23T showed liquid-liquid phase transition behavior similar to that of HGD but the liquid-protein crystal phase transition was altered, suggesting an asymmetric distribution of “sticky” patches on the protein surface [J.J. McManus, A. Lomakin, O. Ogun, A. Pande, M. Basan, J. Pande, G.B. Benedek, Altered phase diagram due to a single point mutation in human gammaD-crystallin, Proc. Natl. Acad. Sci. USA 104 (2007) 16856-16861]. Here we present high-resolution NMR studies of HGD and P23T in which we have made nearly complete backbone assignments. The data provide a structural basis for explaining the retrograde solubility of P23T by (a) identifying possible “sticky” patches on the surface of P23T and (b) highlighting their asymmetric distribution.     

Synthesis and characterization manganese oxide nanobundles from decomposition of manganese oxalate

The present investigation reports, the synthesis of manganese oxide (α-Mn₂O₃) nanobundles using thermal decomposition and its physicochemical characterization. The α-Mn₂O₃ nanobundles have been prepared using manganese oxalate dihydrate powders as precursor in the presence of oleylamine and triphenylphosphine as solvent and capping agent. Transmission electron microscopy (TEM) analysis demonstrated Mn₂O₃ nanobundles compose of nanospheres with diameter 30 nm. The products were characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM), energy dispersive X-ray (EDX), X-ray photoelectron spectroscopy (XPS) and Fourier transform infrared (FT-IR) spectroscopy. Manganese oxide nanocrystals have been prepared under different condition. The controlled experimental results showed that the use of oleylamine and triphenylphosphine as the solvent and capping agent in the chemical process played important role in the formation of the final products.     

Seasonal and Geographical Influences on the Chemical Composition of Juniperus phoenicea L. Essential Oil Leaves from the Northern Tunisia

The essential‐oil composition of 60 individual trees of Juniperus phoenicea L. from four Tunisian populations in three different periods were investigated by GC and GC/MS analyses. 59 Compounds were identified in the oils, and a relatively high variation in their contents was found. All the oils were dominated by the terpenic hydrocarbon fraction, and the main component was α‐pinene (20.28–40.86%). The results of the oil compositions were processed by hierarchical clustering and principal component analysis (PCA) allowing establishing four groups of essential‐oils differentiated by one compound or more. Pattern of geographic variation in essential‐oil composition indicated that individuals from the continental site (Makthar) were clearly distinguished from those from littoral localities (Tabarka, Hawaria, and Rimel).     

Activity profiling of platelets by chemical proteomics

Chemical proteomics or activity based proteomics is a functional proteomics technology where molecular probes are used to target a selective group of functionally related proteins. Its emergence has enabled specific targeting of subproteomes, overcoming the limitations in dynamic range of traditional large‐scale proteomics experiments. Using a chemical proteomics strategy, we attempt to differentially profile the nucleotide‐binding proteome of active and resting platelets. We apply an affinity chromatography protocol using immobilized adenosine triphosphate, cyclic adenosine monophosphate, and cyclic guanosine monophosphate. The specificity of the immobilized nucleotides was demonstrated by competitive assays and by immunoblotting. LC coupled MS/MS was applied to identify the proteins recovered by our chemical proteomics strategy. When compared to a standard set of platelet lysate proteins, we confirmed that enrichment for nucleotide‐binding proteins was indeed taking place. Finally, by employing label‐free MS‐based comparative quantification, we found a small number of platelet proteins that show statistically significant difference between the active and resting nucleotide‐binding proteome.     

蛹虫草培养液成分研究Ⅱ

目的：研究蛹虫草人工培养液的化学成分。方法：利用硅胶柱层析、制备薄层、SephadexLH-20、重结晶等方法分离、纯化单体化合物,并根据理化性质及光谱数据鉴定其化学结构。结果：分离并鉴定了8个化合物,分别为3,7,8-三甲基-异咯嗪（1）;琥珀酸（2）;胸腺嘧啶（3）;虫草素（4）;腺苷（5）;2吲哚乙丁二酰胺（6）;1（-5-羟甲基）-呋喃-3-羧基-β-咔啉（7）;5（-1-甲基丙基）-3,6-氧代-2-哌嗪乙酰胺（8）。结论：化合物1,6,7为首次从虫草属真菌中分离得到。     

蛹虫草培养液成分研究

目的：研究蛹虫草培养液的化学成分。方法：采用硅胶柱色谱等技术分离纯化单体化合物,并根据理化性质及光谱数据鉴定结构。结果：分离并鉴定了8个化合物,分别是2-乙基-3-羟基4H吡喃酮（1）、1-甲酰基-苯并咪唑（2）、3-乙基-4-羟基-6-甲基．2H．吡喃-2-酮（3）、1-甲基-6-异丁基-2,5-哌嗪二酮（4）、1-异丙基-6-异丁基-2,5-哌嗪二酮（5）、3,6-二（对羟基苄基）-2,5-哌嗪二酮（6）、1-羟甲基-6-异丁基-2,5-哌嗪二酮（7）、麦角甾-7-22-二烯-3β,5α,6β-三醇（8）。结论：化合物1-5,7为首次从虫草属真菌中分离得到。     

Uropygial gland volatiles may code for olfactory information about sex,individual, and species in Bengalese finches Lonchura striata

Over-shadowed by eye-catching vocal and visual signals, chemical communication has long been overlooked in birds. This study aimed at exploring whether volatile composition of the uropygial gland secretion （UGS） of birds was associated with the information about sex, individual and species. By using dichloromethane extraction and gas chromatography-mass spectrometry （GC-MS）, we analyzed the UGS volatiles of domesticated Bengalese finches （ Lonchura striata, Estrildiea） which is also known as white-rumped munias. We characterized 16 volatile molecules from the UGS, including eight n-alkanols, five diesters, an ester, an aldehyde and a fatty acid, and quantified them in terms of GC peak area percentages （relative abundances） . Among these compounds, hexadecanol and octadecanol were major components in both sexes. The former was richer in males than in females and the latter richer in females than in males, suggesting that they might be male and female pheromone candidates, respectively. The high inter-individual variations, in relative abundance, of the UGS volatiles implied that these compounds might carry information about individuality. The similarity between GC profiles of the UGS and wing feather from same individuals indicates that the birds might preen the secretion to their feathers to transmit chemical cues. Additionally, by comparing with three sympatric passerine species, i. e., zebra finches Taeniopygia guttata, yellow-bowed buntings Emberiza chrysophrys and rooks Corvus frugilegus, we found that the composition of C13 - C18 alkanols in the UGS might code for information about species. Our study also showed that quantitative differences （degree） of same UGS volatiles might be the key for the Bengalese finch to code for information about sex and individuality whereas both the kind and degree of UGS constituents could be utilized to code for information about species [ Current Zoology 55 （5）： 357-365, 2009].     

Chemical modification of xanthan gum to increase dissolution rate

Xanthan gum is modified with formaldehyde to improve the dissolution rate. The FT-IR spectra and the X-ray diffraction spectra both show that chemical modification reduces intermolecular interactions and crystallinity. Viscosity measurements show that the chemically modified gum dissolves more rapidly than before.     

Chemical modification, characterization and bioactivity of Chinese lacquer polysaccharides from lac tree Rhus vernicifera against leukopenia induced by cyclophosphamide

Lacquer polysaccharide (LP) was isolated from the sap of lac tree (Rhus vernicifera). Its derivatives, carboxymethyl LP, sulfated LP and debranching LP were prepared. Their structure was analyzed by GPC, FT-IR and NMR spectroscopy. The sugar components of carboxymethyl and sulfated LPs hardly changed, but the molecular weight of the former decreased. The side chains of LPs were partially removed using sodium periodate in mild conditions and the pyranose ring β-configuration of products obtained was not changed. Bioactivity of natural and modified LPs against leukopenia induced by cyclophosphamide (CP) was investigated in mice. LP exhibited a significant bioactivity (P<0.05) compared to positive control group (CP). The bioactivity could increase slightly with the increasing of the contents of carboxymethyl groups. However, with the removal of the side chains and the incorporation of sulfate groups, the bioactivity gradually decreased. These showed that the bioactivity of lacquer polysaccharides against leukopenia induced by CP was strongly dependent on the types of ionic groups of the polysaccharides and concerned with the side chains with 4-O-methyl-β-glucuronic acid in the terminal.     

Biological warfare in the garden pond: tadpoles suppress the growth of mosquito larvae

Abstract. 1. Although tadpoles and mosquito larvae may compete for scarce resources in natural freshwater systems, the mechanisms involved in such competition remain largely unstudied.
2. Replicated artificial ponds were set up to examine the role of pathogenic interference (water-borne growth inhibitors) in two tadpole–mosquito systems from south-eastern Australia. One system comprised taxa that are commonly sympatric in freshwater ponds (tadpoles of Limnodynastes peronii and larvae of Culex quinquefasciatus ) while the other comprised species that co-occur in brackish water ponds (tadpoles of Crinia signifera and larvae of Ochlerotatus australis ).
3. Water that had previously contained tadpoles suppressed the rates of survival and pupation of mosquito larvae in both systems. Fungicide reduced or eliminated this effect, suggesting that the growth inhibitors may be fungal organisms (possibly the yeast Rhodotorula glutinis ) from tadpole faeces. Fungicide also enhanced growth rates of tadpoles.
4. These results suggest that interference competition between tadpoles and mosquito larvae is mediated by other organisms in some ecological systems.